Items where Author is "Gruca, Aleksandra"

Article

Ziemska-Legiecka, Joanna and Jarnot, Patryk and Szymańska, Sylwia and Błaszczyk, Dagmara and Staśczak, Alicja and Langer-Macioł, Hanna and Lucińska, Kinga and Widzisz, Karolina and Janas, Aleksandra and Słowik, Hanna and Śliwińska, Wiktoria and Gruca, Aleksandra and Grynberg, Marcin (2024) LCRAnnotationsDB: a database of low complexity regions functional and structural annotations. BMC Genomics, 25 (1251). ISSN 1471-2164

Jarnot, Patryk and Ziemska-Legiecka, Joanna and Grynberg, Marcin and Gruca, Aleksandra (2022) Insights from analyses of low complexity regions with canonical methods for protein sequence comparison. Briefings in Bioinformatics, 23 (5). bbac299. ISSN 1467-5463

Podobas, Ewa Izabela and Gutowska-Owsiak, Danuta and Moretti, Sebastien and Poznański, Jarosław and Kulińczak, Mariusz and Grynberg, Marcin and Gruca, Aleksandra and Bonna, Arkadiusz and Płonka, Dawid and Frączyk, Tomasz and Ogg, Graham and Bal, Wojciech (2022) Ni2+-Assisted Hydrolysis May Affect the Human Proteome; Filaggrin Degradation Ex Vivo as an Example of Possible Consequences. Frontiers in Molecular Biosciences, 9 (828674). ISSN 2296-889X

Gruca, Aleksandra and Ziemska-Legiecka, Joanna and Jarnot, Patryk and Sarnowska, E.A. and Sarnowski, T.J. and Grynberg, Marcin (2021) Common low complexity regions for SARS-CoV-2 and human proteomes as potential multidirectional risk factor in vaccine development. BMC Bioinformatics, 22 (1). p. 182. ISSN 1471-2105

Gruca, Aleksandra and Grynberg, Marcin and Promponas, Vasilis J and Tosatto, Silvio C E and Piovesan, Damiano and Necci, Marco and Paladin, Lisanna and Dosztányi, Zsuzsanna and Hancock, John M and Andrade-Navarro, Miguel A and Mier, Pablo and Merski, Matthew and Dobson, Laszlo and Ziemska-Legiecka, Joanna and Jarnot, Patryk (2020) PlaToLoCo: the first web meta-server for visualization and annotation of low complexity regions in proteins. Nucleic Acids Research, 48 (W1). W77-W84. ISSN 0305-1048

Tørresen, Ole K and Star, Bastiaan and Mier, Pablo and Andrade-Navarro, Miguel A and Bateman, Alex and Jarnot, Patryk and Gruca, Aleksandra and Grynberg, Marcin and Kajava, Andrey V and Promponas, Vasilis J and Anisimova, Maria and Jakobsen, Kjetill S and Linke, Dirk (2019) Tandem repeats lead to sequence assembly errors and impose multi-level challenges for genome and protein databases. Nucleic Acids Research, 47 (21). pp. 10994-11006. ISSN 0305-1048

Mier, Pablo and Paladin, Lisanna and Tamana, Stella and Petrosian, Sophia and Hajdu-Soltész, Borbála and Urbanek, Annika and Gruca, Aleksandra and Plewczynski, Dariusz and Grynberg, Marcin and Bernadó, Pau and Gáspári, Zoltán and Ouzounis, Christos A and Promponas, Vasilis J and Kajava, Andrey V and Hancock, John M and Tosatto, Silvio C E and Dosztányi, Zsuzsanna and Andrade-Navarro, Miguel A (2019) Disentangling the complexity of low complexity proteins. Briefings in Bioinformatics . ISSN 1467-5463