Items where Author is "Muszewska, Anna"

Article

Ciach, Michal Aleksander and Pawłowska, Julia and Górecki, Paweł and Muszewska, Anna (2024) The interkingdom horizontal gene transfer in 44 early diverging fungi boosted their metabolic, adaptive, and immune capabilities. Evolution Letters .

Sokołowska, Blanka and Orłowska, Małgorzata and Okrasińska, Alicja and Piłsyk, Sebastian and Pawłowska, Julia and Muszewska, Anna (2023) What can be lost? Genomic perspective on the lipid metabolism of Mucoromycota. IMA fungus, 14 (22). ISSN 2210-6359 ISSN National Centre for The Netherlands

Orłowska, Małgorzata and Drishtee, Barua and Piłsyk, Sebastian and Muszewska, Anna (2023) Fucose as a nutrient ligand for Dikarya and a building block of early diverging lineages. IMA fungus, 14 (17). ISSN 2210-6359 ISSN National Centre for The Netherlands

Gryganskyi, Andrii and Golan, Jacob and Muszewska, Anna and Idnurm, Alexander and Dolatabadi, Somayeh and Mondo, Stephen and Kutovenko, Vira and Kutovenko, Volodymyr and Gajdeczka, Michael and Anishchenko, Iryna M. and Pawłowska, Julia and Tran, Ngoc Vinh and Ebersberger, Ingo and Voigt, Kerstin and Wang, Yan and Chang, Ying and Pawłowska, Teresa and Heitman, Joseph and Vilgalys, Rytas and Bonito, Gregory and Benny, Gerald and Smith, Matthew and Reynolds, Nicole and James, Timothy and Grigoriev, Igor and Spatafora, Joseph and Stajich, Jason E. (2023) Sequencing the Genomes of the First Terrestrial Fungal Lineages: What Have We Learned? Microorganisms, 11 (7). ISSN 2076-2607

Oppert, Brenda and Muszewska, Anna and Steczkiewicz, Kamil and Šatović-Vukšić, Eva and Plohl, Miroslav and Fabrick, Jeffrey and Vinokurov, Konstantin and Koloniuk, Igor and Johnston, J. and Smith, Timothy and Guedes, Raul and Terra, Walter and Ferreira, Clélia and Dias, Renata and Chaply, Konstantin and Elpidina, Elena and Tereshchenkova, Valeriia and Mitchell, Robert and Jenson, Audra and McKay, Rachel and Shan, Tisheng and Cao, Xiaolong and Miao, Zelong and Xiong, Chao and Jiang, Haobo and Morrison, William and Koren, Sergey and Schlipalius, David and Lorenzen, Marcé and Bansal, Raman and Wang, Yu-Hui and Perkin, Lindsey and Poelchau, Monica and Friesen, Kenlee and Olmstead, Morgan and Scully, Erin and Campbell, James (2022) The Genome of Rhyzopertha dominica (Fab.) (Coleoptera: Bostrichidae): Adaptation for Success. Genes, 13 (3). p. 446. ISSN 2073-4425

Orłowska, Małgorzata and Muszewska, Anna (2022) In Silico Predictions of Ecological Plasticity Mediated by Protein Family Expansions in Early-Diverging Fungi. Journal of Fungi, 8 (1). p. 67. ISSN 2309-608X

Okrasińska, Alicja and Decewicz, Przemyslaw and Majchrowska, Maria and Dziewit, Lukasz and Muszewska, Anna and Dolatabadi, Somayeh and Kruszewski, Łukasz and Błocka, Zuzanna and Pawłowska, Julia (2022) Marginal lands and fungi – linking the type of soil contamination with fungal community composition. Environmental Microbiology, 24 (8). pp. 3809-3825. ISSN 1462-2912

Koczyk, Grzegorz and Pawłowska, Julia and Muszewska, Anna (2021) Terpenoid Biosynthesis Dominates among Secondary Metabolite Clusters in Mucoromycotina Genomes. Journal of Fungi, 7(4) (285).

Muszewska, Anna and Okrasińska, Alicja and Steczkiewicz, Kamil and Drgas, Olga and Orłowska, Małgorzata and Perlinska-Lenart, Urszula and Aleksandrzak-Piekarczyk, Tamara and Szatraj, Katarzyna and Zielenkiewicz, Urszula and Piłsyk, Sebastian and Malc, Ewa and Mieczkowski, Piotr and Kruszewska, Joanna S. and Bernat, Przemysław and Pawłowska, Julia (2021) Metabolic Potential, Ecology and Presence of Associated Bacteria Is Reflected in Genomic Diversity of Mucoromycotina. Frontiers in Microbiology, 12 . p. 239. ISSN ISSN=1664-302X

Orłowska, Małgorzata and Steczkiewicz, Kamil and Muszewska, Anna (2021) Utilization of cobalamin is ubiquitous in early-branching fungal phyla. Genome Biology and Evolution, 13 (4). evab043. ISSN 1759-6653

Golan, Maciej and Piłsyk, Sebastian and Muszewska, Anna and Wawrzyniak, Agata (2020) Ferritins in Chordata: potential evolutionary trajectory marked by discrete selective pressures. BioEssays (e20002). ISSN 1521-1878

Pawłowska, Julia and Okrasinska, Alicja and Kisło, Kamil and Aleksandrzak-Piekarczyk, Tamara and Szatraj, Katarzyna and Dolatabadi, Somayeh and Muszewska, Anna (2019) Carbon assimilation profiles of mucoralean fungi show their metabolic versatility. Scientific Reports, 9 (1). ISSN 2045-2322

Gryz, Elżbieta and Perlinska-Lenart, Urszula and Gawarecka, Katarzyna and Jóźwiak, Adam and Piłsyk, Sebastian and Lipko, Agata and Jemiola-Rzeminska, Małgorzata and Bernat, Przemysław and Muszewska, Anna and Steczkiewicz, Kamil and Ginalski, Krzysztof and Długoński, Jerzy and Strzałka, Kazimierz and Swiezewska, Ewa and Kruszewska, Joanna S. (2019) Poly-saturated dolichols from filamentous fungi modulate activity of dolichol-dependent glycosyltransferase and physical properties of membranes. International Journal of Molecular Sciences, 20 . p. 3043. ISSN 1422-0067

Muszewska, Anna and Steczkiewicz, Kamil and Stepniewska-Dziubinska, Marta M. and Ginalski, Krzysztof (2019) Transposable elements contribute to fungal genes and impact fungal lifestyle. Scientific Reports, 9 (4307). ISSN 2045-2322

Wijayawardene, Nalin N. and Pawłowska, Julia and Letcher, Peter M. and Kirk, Paul M. and Humber, Richard A. and Schussler, Arthur and Wrzosek, Marta and Muszewska, Anna and Okrasinska, Alicja and Istel, Lukasz and Gesiorska, Aleksandra and Mungai, Paul and Lateef, Adebola Azeez and Rajeshkumar, Kunhiraman C. and Singh, Rajshree V. and Radek, Renate and Walther, Grit and Wagner, Lysett and Walker, Christopher and Wijesundara, D. Siril A. and Papizadeh, Moslem and Dolatabadi, Somayeh and Shenoy, Belle D. and Tokarev, Yuri S. and Lumyong, Saisamorn and Hyde, Kevin D. (2018) Notes for genera: basal clades of Fungi (including Aphelidiomycota, Basidiobolomycota, Blastocladiomycota, Calcarisporiellomycota, Caulochytriomycota, Chytridiomycota, Entomophthoromycota, Glomeromycota, Kickxellomycota, Monoblepharomycota, Mortierellomycota, Mucoromycota, Neocallimastigomycota, Olpidiomycota, Rozellomycota and Zoopagomycota). Fungal Diversity . (In Press)

Ciach, Michal and Muszewska, Anna and Górecki, Paweł (2018) Locus-aware decomposition of gene trees with respect to polytomous species trees. Algorithms for Molecular Biology . ISSN 1748-7188

Kirkland, Theo N. and Muszewska, Anna and Stajich, Jason E. (2018) Analysis of Transposable Elements in Coccidioides Species. Journal of Fungi, 4 (1). p. 13.

Muszewska, Anna and Piłsyk, Sebastian and Perlinska-Lenart, Urszula and Kruszewska, Joanna S. (2018) Diversity of Cell Wall Related Proteins in Human Pathogenic Fungi. Journal of Fungi, 4 (1). p. 6.

Poznański, Jarosław and Topiński, Jan and Muszewska, Anna and Dębski, Konrad J. and Hoffman-Sommer, Marta and Pawłowski, Krzysztof and Grynberg, Marcin (2018) Global pentapeptide statistics are far away from expected distributions. Scientific Reports, 8 (1). p. 15178. ISSN 2045-2322

Gryganskyi, Andrii and Golan, Jacob and Dolatabadi, Somayeh and Mondo, Stephen and Robb, Sofia and Idnurm, Alexander and Muszewska, Anna and Steczkiewicz, Kamil and Masonjones, Sawyer and Liao, Hui-Ling and Gajdeczka, Michael T. and Anike, Felicia and Vuek, Antonina and Anishchenko, Iryna M. and Voigt, Kerstin and de Hoog, G. Sybren and Smith, Matthew E. and Heitman, Joseph and Vilgalys, Rytas and Stajich, Jason E. (2018) Phylogenetic and Phylogenomic Definition of Rhizopus Species. G3: Genes|Genomes|Genetics . g3.200235.2018. ISSN 2160-1836

Schoville, Sean D. and Chen, Yolanda H. and Andersson, Martin N. and Benoit, Joshua B. and Bhandari, Anita and Bowsher, Julia H. and Brevik, Kristian and Cappelle, Kaat and Chen, Mei-Ju M. and Childers, Anna K. and Childers, Christopher and Christiaens, Olivier and Clements, Justin and Didion, Elise M. and Elpidina, Elena N. and Engsontia, Patamarerk and Friedrich, Markus and García-Robles, Inmaculada and Gibbs, Richard A. and Goswami, Chandan and Grapputo, Alessandro and Gruden, Kristina and Grynberg, Marcin and Henrissat, B. and Jennings, Emily C. and Jones, Jeffery W. and Kalsi, Megha and Khan, Sher A. and Kumar, Abhishek and Li, Fei and Lombard, Vincent and Ma, Xingzhou and Martynov, Alexander and Miller, Nicholas J. and Mitchell, Robert F. and Munoz-Torres, Monica and Muszewska, Anna and Oppert, Brenda and Palli, Subba Reddy and Panfilio, Kristen A. and Pauchet, Yannick and Perkin, Lindsey C. and Petek, Marko and Poelchau, Monica F. and Record, Éric and Rinehart, Joseph P. and Robertson, Hugh M. and Rosendale, Andrew J. and Ruiz-Arroyo, Victor M. and Smagghe, Guy and Szendrei, Zsofia and Thomas, Gregg W.C. and Torson, Alex S. and Vargas Jentzsch, Iris M. and Weirauch, Matthew T. and Yates, Ashley D. and Yocum, George D. and Yoon, June-Sun and Richards, Stephen (2018) A model species for agricultural pest genomics: the genome of the Colorado potato beetle, Leptinotarsa decemlineata (Coleoptera: Chrysomelidae). Scientific Reports, 8 (1). ISSN 2045-2322

Muszewska, Anna and Steczkiewicz, Kamil and Stepniewska-Dziubinska, Marta M. and Ginalski, Krzysztof (2017) Cut-and-paste transposons in fungi with diverse lifestyles. Genome Biology and Evolution, 9 (12). pp. 3463-3477. ISSN 1759-6653

Kotliński, Maciej and Knizewski, Lukasz and Muszewska, Anna and Rutowicz, Kinga and Lirski, Maciej and Schmidt, Anja and Baroux, Célia and Ginalski, Krzysztof and Jerzmanowski, Andrzej (2017) Phylogeny-Based Systematization of Arabidopsis Proteins with Histone H1 Globular Domain. Plant physiology, 174 (1). pp. 27-34. ISSN 1532-2548

Teixeira, M.M. and Moreno, L.F. and Stielow, B.J. and Muszewska, Anna and Hainaut, M and Gonzaga, L and Abouellei, A. and Patané, J.S.L. and Priest, M. and Souza, R. and Young, S. and Ferreira, K.S. and Zeng, Q. and da Cunha, M.M.L. and Gladki, Arkadiusz and Barker, B. and Vicente, V.A. and de Souza, E.M. and Almeida, S. and Henrissat, B. and Vasconcelo, A.T.R. and Deng, S. and Voglmayr, H. and Moussa, T.A.A. and Gorbushina, A. and Felipe, Maria Sueli and Cuomo, Christina A and Sybren de Hoog, G. (2017) Exploring the genomic diversity of black yeasts and relatives (Chaetothyriales, Ascomycota). Studies in Mycology . ISSN 0166-0616 (In Press)

Muszewska, Anna and Stepniewska-Dziubinska, Marta M. and Steczkiewicz, Kamil and Pawłowska, Julia and Dziedzic, Agata and Ginalski, Krzysztof (2017) Fungal lifestyle reflected in serine protease repertoire. Scientific Reports, 7 . ISSN 2045-2322

Nguyen, Kim and Sreelatha, Anju and Durrant, Eric and Lopez-Garrido, Javier and Muszewska, Anna and Dudkiewicz, Małgorzata and Grynberg, Marcin and Yee, Samantha and Pogliano, Kit and Tomchick, Diana and Pawłowski, Krzysztof and Dixon, Jack and Tagliabracci, Vincent (2016) Phosphorylation of spore coat proteins by a family of atypical protein kinases. Proc Natl Acad Sci U S A, 113 (25). E3482-E3491.

Pawłowska, Julia and Aleksandrzak-Piekarczyk, Tamara and Banach, Agnieszka and Kiersztyn, Bartosz and Muszewska, Anna and Serewa, Lidia and Szatraj, Katarzyna and Wrzosek, Marta (2016) Preliminary studies on the evolution of carbon assimilation abilities within Mucorales. Fungal Biology, 120 (5). pp. 752-763. ISSN 18786146

Kuchta, Krzysztof and Muszewska, Anna and Knizewski, Lukasz and Steczkiewicz, Kamil and Wyrwicz, Lucjan and Pawłowski, Krzysztof and Rychlewski, Leszek and Ginalski, Krzysztof (2016) FAM46 proteins are novel eukaryotic non-canonical poly (A) polymerases. Nucleic acids research . ISSN 1362-4962

Gryganskyi, Andrii and Muszewska, Anna (2014) Whole Genome Sequencing and the Zygomycota. Fungal Genomics & Biology , 4 .

Majorek, Karolina A and Dunin-Horkawicz, Stanislaw and Steczkiewicz, Kamil and Muszewska, Anna and Nowotny, Marcin and Ginalski, Krzysztof and Bujnicki, Janusz M (2014) The RNase H-like superfamily: new members, comparative structural analysis and evolutionary classification. Nucleic acids research, 42 (7). pp. 4160-4179. ISSN 1362-4962

Muszewska, Anna and Pawłowska, Julia and Krzyściak, Paweł (2014) Biology, systematics, and clinical manifestations of Zygomycota infections. European Journal of Clinical Microbiology & Infectious Diseases, 33 (8). pp. 1273-1287.

Muszewska, Anna (2014) Fungal genomes tell a story of ecological adaptations. Folia Biologica et Oecologica , 10 . (In Press)

Szczęsny, Roman J. and Hejnowicz, Monika S and Steczkiewicz, Kamil and Muszewska, Anna and Borowski, Lukasz S and Ginalski, Krzysztof and Dziembowski, Andrzej (2013) Identification of a novel human mitochondrial endo-/exonuclease Ddk1/c20orf72 necessary for maintenance of proper 7S DNA levels. Nucleic acids research . ISSN 1362-4962

Mielecki, Damian and Zugaj, Dorota Łucja and Muszewska, Anna and Piwowarski, Jan and Chojnacka, Aleksandra and Mielecki, Marcin and Nieminuszczy, Jadwiga and Grynberg, Marcin and Grzesiuk, Elzbieta (2012) Novel AlkB Dioxygenases – Alternative Models for In Silico and In Vivo Studies. PloS one, 7 (1). e30588. ISSN 1932-6203

Szczesny, Pawel and Lacovache, Ioan and Muszewska, Anna and Ginalski, Krzysztof and van der Goot, F Gisou and Grynberg, Marcin (2011) Extending the aerolysin family: from bacteria to vertebrates. PloS one, 6 (6). e20349. ISSN 1932-6203

Desjardins, Christopher A and Champion, Mia D and Holder, Jason W and Muszewska, Anna and Goldberg, Jonathan and Bailão, Alexandre M and Brigido, Marcelo Macedo and Ferreira, Márcia Eliana da Silva and Garcia, Ana Maria and Grynberg, Marcin and Gujja, Sharvari and Heiman, David I and Henn, Matthew R and Kodira, Chinnappa D and León-Narváez, Henry and Longo, Larissa V G and Ma, Li-Jun and Malavazi, Iran and Matsuo, Alisson L and Morais, Flavia V and Pereira, Maristela and Rodríguez-Brito, Sabrina and Sakthikumar, Sharadha and Salem-Izacc, Silvia M and Sykes, Sean M and Teixeira, M.M. and Vallejo, Milene C and Walter, Maria Emília Machado Telles and Yandava, Chandri and Young, Sarah and Zeng, Qiandong and Zucker, Jeremy and Felipe, Maria Sueli and Goldman, Gustavo H and Haas, Brian J and McEwen, Juan G and Nino-Vega, Gustavo and Puccia, Rosana and San-Blas, Gioconda and Soares, Celia Maria de Almeida and Birren, Bruce W and Cuomo, Christina A (2011) Comparative genomic analysis of human fungal pathogens causing paracoccidioidomycosis. PLoS genetics, 7 (10). e1002345. ISSN 1553-7404

Muszewska, Anna and Taylor, John W. and Szczesny, Pawel and Grynberg, Marcin (2011) Independent Subtilases Expansions in Fungi Associated with Animals. Molecular Biology and Evolution .

Muszewska, Anna and Hoffman-Sommer, Marta and Grynberg, Marcin (2011) LTR retrotransposons in fungi. PloS one, 6 (12). e29425. ISSN 1932-6203

Pawłowski, Krzysztof and Muszewska, Anna and Lenart, Anna and Szczepińska, Teresa and Godzik, Adam and Grynberg, Marcin (2010) A widespread peroxiredoxin-like domain present in tumor suppression- and progression-implicated proteins. BMC genomics, 11 . p. 590. ISSN 1471-2164